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pour221/README.md

🧬 Bio Projects

Projects related to bioinformatics, data analysis and scientific work.

trann

A small script with a console interface for adding labels to the leaves of phylogenetic trees in the newick format.

samplaction

CLI tool for selecting a more homogeneous subset of genome assemblies

ms-qc-notebook

Jupyter notebook for base quality control of mass spectrometry data.

Codon Usage Analysis

Comparative analysis of codon usage bias across microbial genomes using RSCU, ENC, PCA/PCoA and Mash distances.

🛠 Pet Projects

Personal projects not directly related to bioinformatics. Mostly engineering, automation and experimentation.

Recipe Book Telegram Bot

Telegram bot for storing recipes

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  1. trann trann Public

    A simple Python command-line tool for adding annotations to phylogenetic trees in the newick format

    Python 2

  2. samplaction samplaction Public

    CLI tool for assembly QC summarization and outlier filtering

    Python

  3. codon_usage codon_usage Public

    Codon usage analysis across microbial genomes using codon frequencies, RSCU, ENC, PCA and Mash genome distance comparison.

    Jupyter Notebook

  4. RecipeBookBot RecipeBookBot Public

    This Telegram bot is your personal recipe book — write down, search, and share recipes easily, directly in Telegram.

    Python 1