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alt_allele_prob_file format change#32

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RosCraddock wants to merge 1 commit intoAlphaGenes:develfrom
RosCraddock:feat_pheno_info
Open

alt_allele_prob_file format change#32
RosCraddock wants to merge 1 commit intoAlphaGenes:develfrom
RosCraddock:feat_pheno_info

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@RosCraddock
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alt_allele_prob_file format change so metafounders by column and loci by rows. Additional error handling and allowing a single column of loci without a "MF_" header. Corresponding changes in AlphaPeel (AlphaGenes/AlphaPeel@5d95afc).
New format for alt_allele_prob_file
With one or none metafounders, four loci
0.1
0.2
0.4
0.5

or

MF_1
0.1
0.2
0.4
0.5

For two metafounders, four loci
MF_1 MF_2
0.1 0.5
0.2 0.6
0.4 0.2
0.5 0.1

`alt_allele_prob_file` format change so metafounders by column and loci by rows. Additional error handling and allowing a single column of loci without a "MF_" header.
@gregorgorjanc
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@XingerTang can you review this PR?

@XingerTang
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Relate to AlphaGenes/AlphaPeel#219

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3 participants