Why does my CLIPper installation show an incorrect usage message after installation? #124
Description
Why does my CLIPper installation show an incorrect usage message after installation?
clipper --help
Usage is :▒ [options]
file_in is a file with a list of the length of aligned reads (only the part that aligns)
Options
-L Effective Gene Length
-r # of iterations
-f input file containing read lengths
-a B-H FDR cutoff, default(.05) ... gets very slow as alpha gets smaller
-T 1/0 default(0) print running time statistics
Output:
Significance Threshold [tab] Iterations with this observed threshold