diff --git a/.env.example b/.env.example index 5e04976..2a03494 100644 --- a/.env.example +++ b/.env.example @@ -6,3 +6,10 @@ JWT_ALGORITHM=HS256 JWT_EXPIRE_MINUTES=1440 FRONTEND_URL=http://localhost:5173 DATABASE_URL=sqlite:///./workmate.db + +# AI / LLM +GEMINI_API_KEY=your-gemini-api-key +VOYAGE_API_KEY=your-voyageai-api-key + +# Notion (direct API access — optional, JSON import works without this) +NOTION_TOKEN=your-notion-api-token diff --git a/.gitignore b/.gitignore index d597387..6ee26c7 100644 --- a/.gitignore +++ b/.gitignore @@ -46,4 +46,10 @@ chroma_db/ # Antigravity SKILLS .agent/ -CLAUDE.md \ No newline at end of file +CLAUDE.md +.claude/ + +# Debugging +Tasks_for_Claude.txt +debug_rag.py +generate_token.py \ No newline at end of file diff --git a/pyproject.toml b/pyproject.toml index 8b87489..08c22d6 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -19,4 +19,6 @@ dependencies = [ "python-multipart>=0.0.22", "pypdf2>=3.0.1", "sse-starlette>=3.3.2", + "voyageai>=0.3.7", + "bm25s>=0.2.12", ] diff --git a/src/backend/app.py b/src/backend/app.py index f50570e..4a0005b 100644 --- a/src/backend/app.py +++ b/src/backend/app.py @@ -3,7 +3,7 @@ from src.backend.config import settings from src.backend.database import Base, engine -from src.backend.routers import admin, auth, chat, conversations, upload +from src.backend.routers import admin, auth, conversations, upload def create_app() -> FastAPI: @@ -21,7 +21,6 @@ def create_app() -> FastAPI: app.include_router(auth.router) app.include_router(admin.router) - app.include_router(chat.router) app.include_router(conversations.router) app.include_router(upload.router) diff --git a/src/backend/config.py b/src/backend/config.py index d0a986a..f48c471 100644 --- a/src/backend/config.py +++ b/src/backend/config.py @@ -11,6 +11,7 @@ class Settings(BaseSettings): FRONTEND_URL: str = "http://localhost:5173" DATABASE_URL: str = "sqlite:///./workmate.db" GEMINI_API_KEY: str = "" + VOYAGE_API_KEY: str = "" NOTION_TOKEN: str = "" model_config = {"env_file": ".env", "extra": "ignore"} diff --git a/src/backend/dependencies/services.py b/src/backend/dependencies/services.py index 62b3665..f98b95d 100644 --- a/src/backend/dependencies/services.py +++ b/src/backend/dependencies/services.py @@ -1,14 +1,21 @@ import logging +import os from fastapi import HTTPException +from src.backend.load.bm25_manager import BM25Manager, BM25_INDEX_PATH from src.backend.load.chroma_manager import ChromaManager +from src.backend.load.hybrid_retriever import HybridRetriever from src.backend.llm.gemini_client import GeminiClient +from src.backend.llm.voyage_reranker import VoyageReranker logger = logging.getLogger(__name__) _chroma_manager = None _gemini_client = None +_voyage_reranker = None +_bm25_manager = None +_hybrid_retriever = None def get_chroma_manager() -> ChromaManager: @@ -33,3 +40,32 @@ def get_gemini_client() -> GeminiClient: logger.error(f"Failed to initialize GeminiClient: {e}") raise HTTPException(status_code=500, detail="LLM configuration missing.") return _gemini_client + + +def get_voyage_reranker() -> VoyageReranker: + global _voyage_reranker + if _voyage_reranker is None: + try: + _voyage_reranker = VoyageReranker() + except Exception as e: + logger.error(f"Failed to initialize VoyageReranker: {e}") + raise HTTPException(status_code=500, detail="Reranker configuration missing.") + return _voyage_reranker + + +def get_bm25_manager() -> BM25Manager: + global _bm25_manager + if _bm25_manager is None: + _bm25_manager = BM25Manager() + if os.path.exists(BM25_INDEX_PATH): + _bm25_manager.load(BM25_INDEX_PATH) + else: + logger.warning(f"BM25 index not found at {BM25_INDEX_PATH}. Run NotionIngestor to build it.") + return _bm25_manager + + +def get_hybrid_retriever() -> HybridRetriever: + global _hybrid_retriever + if _hybrid_retriever is None: + _hybrid_retriever = HybridRetriever(get_chroma_manager(), get_bm25_manager()) + return _hybrid_retriever diff --git a/src/backend/llm/gemini_client.py b/src/backend/llm/gemini_client.py index abdc6cd..9859c98 100644 --- a/src/backend/llm/gemini_client.py +++ b/src/backend/llm/gemini_client.py @@ -33,14 +33,25 @@ def filter_chunks( ) -> List[Dict[str, Any]]: """ LLM Re-ranking: Asks Gemini to filter out irrelevant chunks before generation. + Uses sequential chunk_N IDs (chunk_1, chunk_2, ...) for the filter prompt so + the LLM and the matching logic agree on the same ID format. """ if not chunks: return [] - prompt = prompts.get_filter_prompt(chunks, user_question) + # Remap chunks to sequential IDs for the filter prompt so the LLM + # returns predictable IDs like "chunk_1, chunk_3" instead of UUIDs. + sequential_id_map: Dict[str, Dict[str, Any]] = {} + remapped_chunks = [] + for i, chunk in enumerate(chunks, start=1): + seq_id = f"chunk_{i}" + sequential_id_map[seq_id] = chunk + remapped_chunks.append({**chunk, "chunk_id": seq_id}) + + prompt = prompts.get_filter_prompt(remapped_chunks, user_question) cfg = types.GenerateContentConfig( system_instruction=prompts.FILTER_SYSTEM_INSTRUCTION, - temperature=0.0, # Zero precision for extraction + temperature=0.0, max_output_tokens=100, ) @@ -51,40 +62,37 @@ def filter_chunks( config=cfg, ) output = getattr(response, "text", "") or "" - print(f"🧠 Re-ranker Output: {output}") - + print(f"Re-ranker Output: {output}") + if "NONE" in output.upper(): - print("🧠 Re-ranker kept 0 chunks.") + print("Re-ranker kept 0 chunks.") return [] - - # Parse the output safely: sometimes Gemini returns a clean comma-separated list of UUIDs - # But sometimes it's lazy and returns just the first part e.g. "30, 4f" instead of "302f24..." - filtered_chunks = [] + + # Match returned IDs (e.g. "chunk_1, chunk_3") back to original chunks. output_parts = [p.strip() for p in output.split(",") if p.strip()] - - for chunk in chunks: - chunk_id = str(chunk["chunk_id"]) - - # Check 1: Is the full chunk_id anywhere in the raw output string? - if chunk_id in output: - filtered_chunks.append(chunk) + filtered_chunks = [] + seen = set() + for part in output_parts: + # Exact match: "chunk_3" + if part in sequential_id_map and part not in seen: + filtered_chunks.append(sequential_id_map[part]) + seen.add(part) continue - - # Check 2: Did the LLM abbreviate the IDs? Check each comma-separated part. - for part in output_parts: - if len(part) >= 2 and chunk_id.startswith(part): - filtered_chunks.append(chunk) - break - - print(f"🧠 Re-ranker kept {len(filtered_chunks)}/{len(chunks)} chunks.") - - # Fallback to all chunks if zero were matched but it didn't explicitly say "NONE" + # Plain number match: LLM returned "3" instead of "chunk_3" + candidate = f"chunk_{part}" + if candidate in sequential_id_map and candidate not in seen: + filtered_chunks.append(sequential_id_map[candidate]) + seen.add(candidate) + + print(f"Re-ranker kept {len(filtered_chunks)}/{len(chunks)} chunks.") + + # Fallback: if nothing matched but LLM didn't say NONE, return all chunks. if not filtered_chunks: - return chunks + return chunks return filtered_chunks - + except Exception as e: - logger.warning(f"⚠️ Re-ranking failed (falling back to all chunks): {e}") + logger.warning(f"Re-ranking failed (falling back to all chunks): {e}") return chunks def ask_workmate( diff --git a/src/backend/llm/voyage_reranker.py b/src/backend/llm/voyage_reranker.py new file mode 100644 index 0000000..03c915a --- /dev/null +++ b/src/backend/llm/voyage_reranker.py @@ -0,0 +1,106 @@ +from __future__ import annotations + +import logging +import os +from typing import Any, Dict, List, Tuple + +logger = logging.getLogger(__name__) + +DEFAULT_RERANK_MODEL = "rerank-2" +RELEVANCE_THRESHOLD = 0.3 + + +class VoyageReranker: + """ + Reranks retrieved chunks using the VoyageAI rerank API. + Replaces the LLM-based filter_chunks step in the RAG pipeline. + """ + + def __init__( + self, + model: str = DEFAULT_RERANK_MODEL, + threshold: float = RELEVANCE_THRESHOLD, + ): + api_key = os.getenv("VOYAGE_API_KEY") + if not api_key: + logger.warning( + "[VoyageReranker] VOYAGE_API_KEY not set — reranking disabled. " + "Set VOYAGE_API_KEY in .env to enable VoyageAI reranking." + ) + self.client = None + else: + import voyageai + self.client = voyageai.Client(api_key=api_key) + + self.model = model + self.threshold = threshold + + def rerank( + self, + chunks: List[Dict[str, Any]], + query: str, + top_k: int = 5, + ) -> Tuple[List[Dict[str, Any]], List[Dict[str, Any]]]: + """ + Rerank chunks by relevance to the query. + + Returns: + final_chunks — top_k chunks above threshold, score field stripped (clean for generation) + scored_chunks — all input chunks sorted by score descending, with rerank_score added + """ + if not chunks: + return [], [] + + if self.client is None: + logger.warning("[VoyageReranker] Reranking skipped (no API key). Returning top_k unranked.") + return chunks[:top_k], [] + + documents = [ + f"Page: {c['page_title']}\nSection: {c['section']}\n{c['text']}" + if c.get("section") + else f"Page: {c['page_title']}\n{c['text']}" + for c in chunks + ] + + try: + result = self.client.rerank( + query=query, + documents=documents, + model=self.model, + top_k=len(chunks), # fetch all scores; we apply threshold + top_k ourselves + ) + + scored_chunks: List[Dict[str, Any]] = [] + for item in result.results: + chunk = chunks[item.index] + scored_chunks.append({**chunk, "rerank_score": round(item.relevance_score, 4)}) + + scored_chunks.sort(key=lambda x: x["rerank_score"], reverse=True) + + logger.info( + f"[VoyageReranker] scores: " + f"{[(c['page_title'], c['rerank_score']) for c in scored_chunks]}" + ) + + above_threshold = [c for c in scored_chunks if c["rerank_score"] >= self.threshold] + final_scored = above_threshold[:top_k] + + if not final_scored: + logger.warning( + f"[VoyageReranker] All {len(chunks)} chunks below threshold " + f"({self.threshold}). Top score: " + f"{scored_chunks[0]['rerank_score'] if scored_chunks else 'N/A'}." + ) + + # Strip rerank_score before passing to generation prompt + final_chunks = [ + {k: v for k, v in c.items() if k != "rerank_score"} for c in final_scored + ] + + return final_chunks, scored_chunks + + except Exception as e: + logger.warning( + f"[VoyageReranker] Reranking failed, falling back to top {top_k} unranked: {e}" + ) + return chunks[:top_k], [] diff --git a/src/backend/load/bm25_manager.py b/src/backend/load/bm25_manager.py new file mode 100644 index 0000000..2d06100 --- /dev/null +++ b/src/backend/load/bm25_manager.py @@ -0,0 +1,77 @@ +import logging +import os +import pickle + +import bm25s + +logger = logging.getLogger(__name__) + +PROJECT_ROOT = os.path.abspath(os.path.join(os.path.dirname(__file__), "../../../")) +BM25_INDEX_PATH = os.path.join(PROJECT_ROOT, "workmate_db", "bm25_index.pkl") + + +class BM25Manager: + def __init__(self): + self.index = None + self.chunks: list[str] = [] + self.metadatas: list[dict] = [] + self.ids: list[str] = [] + + def build_index(self, chunks: list[str], metadatas: list[dict], ids: list[str]): + self.chunks = chunks + self.metadatas = metadatas + self.ids = ids + + corpus_indices = list(range(len(chunks))) + indexed_texts = [ + f"{m.get('title', '')} {c}".lower() + for c, m in zip(chunks, metadatas) + ] + tokenized_corpus = bm25s.tokenize(indexed_texts) + self.index = bm25s.BM25(corpus=corpus_indices) + self.index.index(tokenized_corpus) + logger.info(f"BM25 index built with {len(chunks)} documents") + + def search(self, query: str, top_k: int = 10) -> list[dict]: + if self.index is None: + logger.warning("BM25 index not built, returning empty results") + return [] + + k = min(top_k, len(self.chunks)) + query_tokens = bm25s.tokenize([query.lower()]) + results, _ = self.index.retrieve(query_tokens, k=k) + + output = [] + for idx in results[0]: + meta = self.metadatas[idx] + output.append({ + "chunk_id": self.ids[idx], + "text": self.chunks[idx], + "page_title": meta.get("title", "Unknown Source"), + "section": meta.get("parent_title", ""), + **meta, + }) + return output + + def save(self, path: str = BM25_INDEX_PATH): + os.makedirs(os.path.dirname(path), exist_ok=True) + with open(path, "wb") as f: + pickle.dump( + { + "index": self.index, + "chunks": self.chunks, + "metadatas": self.metadatas, + "ids": self.ids, + }, + f, + ) + logger.info(f"BM25 index saved to {path}") + + def load(self, path: str = BM25_INDEX_PATH): + with open(path, "rb") as f: + data = pickle.load(f) + self.index = data["index"] + self.chunks = data["chunks"] + self.metadatas = data["metadatas"] + self.ids = data["ids"] + logger.info(f"BM25 index loaded from {path} ({len(self.chunks)} documents)") diff --git a/src/backend/load/chroma_manager.py b/src/backend/load/chroma_manager.py index e88ea3b..d8f792b 100644 --- a/src/backend/load/chroma_manager.py +++ b/src/backend/load/chroma_manager.py @@ -39,7 +39,7 @@ def __init__(self, db_path=DEFAULT_DB_PATH, collection_name="notion_docs"): name=collection_name ) print( - f"✅ Connected to ChromaDB at '{db_path}' (Collection: '{collection_name}') with Google Embedder" + f"Connected to ChromaDB at '{db_path}' (Collection: '{collection_name}') with Google Embedder" ) def add_documents(self, documents, metadatas, ids, batch_size=20): @@ -61,9 +61,9 @@ def add_documents(self, documents, metadatas, ids, batch_size=20): ids=batch_ids, embeddings=embeddings, ) - print(f"✅ Added batch {i // batch_size + 1} ({len(batch_docs)} docs, {i + len(batch_docs)}/{total})") + print(f"Added batch {i // batch_size + 1} ({len(batch_docs)} docs, {i + len(batch_docs)}/{total})") except Exception as e: - print(f"❌ Error adding batch {i // batch_size + 1}: {e}") + print(f"Error adding batch {i // batch_size + 1}: {e}") raise e def query(self, query_text, n_results=5, where=None): @@ -71,7 +71,7 @@ def query(self, query_text, n_results=5, where=None): Search the collection for relevant documents. Embeds the query using Google Embedder before searching. """ - print(f"🔍 Querying: '{query_text}'...") + print(f"Querying: '{query_text}'...") # Embed the query with the same Google model used during ingestion query_embedding = self.embedder([query_text]) @@ -105,4 +105,4 @@ def reset(self): self.collection = self.client.get_or_create_collection( self.collection_name ) - print(f"⚠️ Collection '{self.collection_name}' has been reset.") + print(f"Collection '{self.collection_name}' has been reset.") diff --git a/src/backend/load/hybrid_retriever.py b/src/backend/load/hybrid_retriever.py new file mode 100644 index 0000000..00bbe9d --- /dev/null +++ b/src/backend/load/hybrid_retriever.py @@ -0,0 +1,58 @@ +import logging + +from src.backend.load.bm25_manager import BM25Manager +from src.backend.load.chroma_manager import ChromaManager + +logger = logging.getLogger(__name__) + + +class HybridRetriever: + def __init__(self, chroma_manager: ChromaManager, bm25_manager: BM25Manager): + self.chroma = chroma_manager + self.bm25 = bm25_manager + + def search( + self, + query: str, + vector_top_k: int = 15, + bm25_top_k: int = 15, + final_top_k: int = 15, + ) -> list[dict]: + vector_results = self._query_chroma(query, vector_top_k) + bm25_results = self.bm25.search(query, top_k=bm25_top_k) + + merged = self.reciprocal_rank_fusion([vector_results, bm25_results]) + return merged[:final_top_k] + + def _query_chroma(self, query: str, top_k: int) -> list[dict]: + results = self.chroma.query(query, n_results=top_k) + output = [] + if results and results.get("documents") and results["documents"][0]: + docs = results["documents"][0] + metas = results.get("metadatas", [[]])[0] + ids = results.get("ids", [[]])[0] + for doc, meta, chunk_id in zip(docs, metas, ids): + output.append({ + "chunk_id": chunk_id, + "text": doc.strip().replace("\r\n", "\n"), + "page_title": meta.get("title", "Unknown Source"), + "section": meta.get("parent_title", ""), + **meta, + }) + return output + + def reciprocal_rank_fusion( + self, results_lists: list[list[dict]], k: int = 60 + ) -> list[dict]: + scores: dict[str, float] = {} + chunk_data: dict[str, dict] = {} + + for results in results_lists: + for rank, chunk in enumerate(results): + chunk_id = chunk["chunk_id"] + scores[chunk_id] = scores.get(chunk_id, 0.0) + 1 / (k + rank + 1) + if chunk_id not in chunk_data: + chunk_data[chunk_id] = chunk + + sorted_ids = sorted(scores, key=lambda x: scores[x], reverse=True) + return [chunk_data[cid] for cid in sorted_ids] diff --git a/src/backend/routers/chat.py b/src/backend/routers/chat.py index f9a5ed9..17c4724 100644 --- a/src/backend/routers/chat.py +++ b/src/backend/routers/chat.py @@ -1,124 +1,124 @@ -import logging +# import logging -from fastapi import APIRouter, Depends, HTTPException +# from fastapi import APIRouter, Depends, HTTPException -from src.backend.dependencies.services import get_chroma_manager, get_gemini_client -from src.backend.load.chroma_manager import ChromaManager -from src.backend.llm.gemini_client import GeminiClient -from src.backend.schemas.chat import ChatRequest, ChatResponse +# from src.backend.dependencies.services import get_chroma_manager, get_gemini_client +# from src.backend.load.chroma_manager import ChromaManager +# from src.backend.llm.gemini_client import GeminiClient +# from src.backend.schemas.chat import ChatRequest, ChatResponse -router = APIRouter(prefix="/api/chat", tags=["Chat"]) -logger = logging.getLogger(__name__) +# router = APIRouter(prefix="/api/chat", tags=["Chat"]) +# logger = logging.getLogger(__name__) -MAX_CONTEXT_CHARS = 4000 +# MAX_CONTEXT_CHARS = 4000 -@router.post("/ask", response_model=ChatResponse) -async def ask_question( - request: ChatRequest, - chroma: ChromaManager = Depends(get_chroma_manager), - gemini: GeminiClient = Depends(get_gemini_client), -): - """ - RAG Pipeline Endpoint: - 1. Retrieves relevant documents from the ChromaDB vector store. - 2. Expands context by fetching sibling chunks from the same parent. - 3. Combines them into a structured chunks list. - 4. Calls Gemini LLM using the WorkMate prompt. - """ - try: - # Step 1: Initial Retrieval (Fetch 10 to balance page coverage and API limits) - results = chroma.query(request.question, n_results=10) +# @router.post("/ask", response_model=ChatResponse) +# async def ask_question( +# request: ChatRequest, +# chroma: ChromaManager = Depends(get_chroma_manager), +# gemini: GeminiClient = Depends(get_gemini_client), +# ): +# """ +# RAG Pipeline Endpoint: +# 1. Retrieves relevant documents from the ChromaDB vector store. +# 2. Expands context by fetching sibling chunks from the same parent. +# 3. Combines them into a structured chunks list. +# 4. Calls Gemini LLM using the WorkMate prompt. +# """ +# try: +# # Step 1: Initial Retrieval (Fetch 10 to balance page coverage and API limits) +# results = chroma.query(request.question, n_results=10) - # Collect initial results into a dict keyed by chunk ID for deduplication - seen_ids = set() - chunks_with_meta = [] # list of (doc_text, metadata, chunk_id) - source_titles = set() +# # Collect initial results into a dict keyed by chunk ID for deduplication +# seen_ids = set() +# chunks_with_meta = [] # list of (doc_text, metadata, chunk_id) +# source_titles = set() - if results and results.get("documents") and results["documents"][0]: - docs = results["documents"][0] - metas = ( - results["metadatas"][0] - if results.get("metadatas") - else [{}] * len(docs) - ) - ids = ( - results["ids"][0] - if results.get("ids") - else [str(i) for i in range(len(docs))] - ) +# if results and results.get("documents") and results["documents"][0]: +# docs = results["documents"][0] +# metas = ( +# results["metadatas"][0] +# if results.get("metadatas") +# else [{}] * len(docs) +# ) +# ids = ( +# results["ids"][0] +# if results.get("ids") +# else [str(i) for i in range(len(docs))] +# ) - for doc, meta, chunk_id in zip(docs, metas, ids): - if chunk_id not in seen_ids: - seen_ids.add(chunk_id) - chunks_with_meta.append((doc, meta, chunk_id)) +# for doc, meta, chunk_id in zip(docs, metas, ids): +# if chunk_id not in seen_ids: +# seen_ids.add(chunk_id) +# chunks_with_meta.append((doc, meta, chunk_id)) - # Step 2: Sibling Expansion — only for very short chunks (likely incomplete) - parent_ids_to_expand = set() - for doc_text, meta, chunk_id in chunks_with_meta: - if len(doc_text.strip()) < 100: # Only expand short/incomplete chunks - parent_id = meta.get("parent_id") - if parent_id: - parent_ids_to_expand.add(parent_id) +# # Step 2: Sibling Expansion — only for very short chunks (likely incomplete) +# parent_ids_to_expand = set() +# for doc_text, meta, chunk_id in chunks_with_meta: +# if len(doc_text.strip()) < 100: # Only expand short/incomplete chunks +# parent_id = meta.get("parent_id") +# if parent_id: +# parent_ids_to_expand.add(parent_id) - for parent_id in parent_ids_to_expand: - sibling_results = chroma.get_by_parent(parent_id, limit=5) - if sibling_results and sibling_results.get("documents"): - sib_docs = sibling_results["documents"] - sib_metas = sibling_results.get("metadatas", [{}] * len(sib_docs)) - sib_ids = sibling_results.get("ids", [str(i) for i in range(len(sib_docs))]) +# for parent_id in parent_ids_to_expand: +# sibling_results = chroma.get_by_parent(parent_id, limit=5) +# if sibling_results and sibling_results.get("documents"): +# sib_docs = sibling_results["documents"] +# sib_metas = sibling_results.get("metadatas", [{}] * len(sib_docs)) +# sib_ids = sibling_results.get("ids", [str(i) for i in range(len(sib_docs))]) - for doc, meta, chunk_id in zip(sib_docs, sib_metas, sib_ids): - if chunk_id not in seen_ids: - seen_ids.add(chunk_id) - chunks_with_meta.append((doc, meta, chunk_id)) +# for doc, meta, chunk_id in zip(sib_docs, sib_metas, sib_ids): +# if chunk_id not in seen_ids: +# seen_ids.add(chunk_id) +# chunks_with_meta.append((doc, meta, chunk_id)) - # Step 3: Build formatted context list - all_chunks = [] - for doc, meta, chunk_id in chunks_with_meta: - clean_doc = doc.strip().replace("\r\n", "\n") - all_chunks.append({ - "chunk_id": chunk_id, - "page_title": meta.get("title", "Unknown Source"), - "section": meta.get("parent_title", ""), - "text": clean_doc, - }) +# # Step 3: Build formatted context list +# all_chunks = [] +# for doc, meta, chunk_id in chunks_with_meta: +# clean_doc = doc.strip().replace("\r\n", "\n") +# all_chunks.append({ +# "chunk_id": chunk_id, +# "page_title": meta.get("title", "Unknown Source"), +# "section": meta.get("parent_title", ""), +# "text": clean_doc, +# }) - # Step 4: LLM Re-ranking (Filter out irrelevant project proposals) - filtered_chunks = gemini.filter_chunks(all_chunks, request.question) +# # Step 4: LLM Re-ranking (Filter out irrelevant project proposals) +# filtered_chunks = gemini.filter_chunks(all_chunks, request.question) - # Enforce maximum of 3 chunks and context cap - final_chunks = [] - total_chars = 0 - for chunk in filtered_chunks[:3]: - # Respect context cap - text = chunk["text"] - if total_chars + len(text) > MAX_CONTEXT_CHARS: - remaining = MAX_CONTEXT_CHARS - total_chars - if remaining > 100: - chunk["text"] = text[:remaining] + "... [truncated]" - else: - break +# # Enforce maximum of 3 chunks and context cap +# final_chunks = [] +# total_chars = 0 +# for chunk in filtered_chunks[:3]: +# # Respect context cap +# text = chunk["text"] +# if total_chars + len(text) > MAX_CONTEXT_CHARS: +# remaining = MAX_CONTEXT_CHARS - total_chars +# if remaining > 100: +# chunk["text"] = text[:remaining] + "... [truncated]" +# else: +# break - final_chunks.append(chunk) - source_titles.add(chunk["page_title"]) - total_chars += len(chunk["text"]) +# final_chunks.append(chunk) +# source_titles.add(chunk["page_title"]) +# total_chars += len(chunk["text"]) - sources_list = sorted(source_titles) +# sources_list = sorted(source_titles) - # Step 5: Generation using only the filtered, relevant chunks - answer = gemini.ask_workmate( - chunks=final_chunks, - user_question=request.question, - debug=request.debug, - ) +# # Step 5: Generation using only the filtered, relevant chunks +# answer = gemini.ask_workmate( +# chunks=final_chunks, +# user_question=request.question, +# debug=request.debug, +# ) - return ChatResponse( - answer=answer, - sources=sources_list, - chunks=final_chunks, - unfiltered_chunks=all_chunks, - ) +# return ChatResponse( +# answer=answer, +# sources=sources_list, +# chunks=final_chunks, +# unfiltered_chunks=all_chunks, +# ) - except Exception as e: - logger.error(f"Error processing RAG query: {e}") - raise HTTPException(status_code=500, detail=str(e)) +# except Exception as e: +# logger.error(f"Error processing RAG query: {e}") +# raise HTTPException(status_code=500, detail=str(e)) diff --git a/src/backend/routers/conversations.py b/src/backend/routers/conversations.py index b1fc7bb..62759b0 100644 --- a/src/backend/routers/conversations.py +++ b/src/backend/routers/conversations.py @@ -8,11 +8,12 @@ from src.backend.database import get_db from src.backend.dependencies.auth import get_current_user -from src.backend.dependencies.services import get_chroma_manager, get_gemini_client -from src.backend.load.chroma_manager import ChromaManager +from src.backend.dependencies.services import get_gemini_client, get_hybrid_retriever, get_voyage_reranker +from src.backend.load.hybrid_retriever import HybridRetriever from src.backend.llm.gemini_client import GeminiClient +from src.backend.llm.voyage_reranker import VoyageReranker from src.backend.models.conversation import Conversation, MessageRecord -from src.backend.routers.chat import MAX_CONTEXT_CHARS +MAX_CONTEXT_CHARS = 5000 from src.backend.models.user import User from src.backend.schemas.conversation import ( ConversationDetail, @@ -75,8 +76,9 @@ async def send_message( request: SendMessageRequest, current_user: User = Depends(get_current_user), db: Session = Depends(get_db), - chroma: ChromaManager = Depends(get_chroma_manager), + hybrid: HybridRetriever = Depends(get_hybrid_retriever), gemini: GeminiClient = Depends(get_gemini_client), + reranker: VoyageReranker = Depends(get_voyage_reranker), ): conv = ( db.query(Conversation) @@ -94,38 +96,26 @@ async def send_message( ) db.add(user_msg) - # Build conversation history from last 6 messages + # Build conversation history from last 6 messages (user_msg not yet committed) conversation_history = [ {"role": m.role, "content": m.content} for m in (conv.messages or [])[-6:] ] # RAG pipeline try: - # Step 1: Initial Retrieval (Fetch 10 to balance page coverage and API limits) - results = chroma.query(request.question, n_results=10) - - seen_ids = set() - chunks_with_meta = [] - - if results and results.get("documents") and results["documents"][0]: - docs = results["documents"][0] - metas = results.get("metadatas", [{}])[0] if results.get("metadatas") else [{}] * len(docs) - ids = results.get("ids", [[]])[0] if results.get("ids") else [str(i) for i in range(len(docs))] - - for doc, meta, chunk_id in zip(docs, metas, ids): - if chunk_id not in seen_ids: - seen_ids.add(chunk_id) - chunks_with_meta.append((doc, meta, chunk_id)) + # Step 1: Hybrid Retrieval (vector + BM25, merged via RRF) + all_chunks = hybrid.search(request.question, vector_top_k=15, bm25_top_k=15, final_top_k=15) # Step 2: Sibling Expansion + seen_ids = {chunk["chunk_id"] for chunk in all_chunks} parent_ids_to_expand = { - meta.get("parent_id") - for doc_text, meta, _ in chunks_with_meta - if len(doc_text.strip()) < 100 and meta.get("parent_id") + chunk.get("parent_id") + for chunk in all_chunks + if len(chunk["text"].strip()) < 100 and chunk.get("parent_id") } for parent_id in parent_ids_to_expand: - sibling_results = chroma.get_by_parent(parent_id, limit=5) + sibling_results = hybrid.chroma.get_by_parent(parent_id, limit=5) if sibling_results and sibling_results.get("documents"): sib_docs = sibling_results["documents"] sib_metas = sibling_results.get("metadatas", [{}] * len(sib_docs)) @@ -134,25 +124,28 @@ async def send_message( for doc, meta, chunk_id in zip(sib_docs, sib_metas, sib_ids): if chunk_id not in seen_ids: seen_ids.add(chunk_id) - chunks_with_meta.append((doc, meta, chunk_id)) + all_chunks.append({ + "chunk_id": chunk_id, + "page_title": meta.get("title", "Unknown Source"), + "section": meta.get("parent_title", ""), + "text": doc.strip().replace("\r\n", "\n"), + }) + + # Step 3: VoyageAI Re-ranking + reranked_for_generation, scored_chunks = reranker.rerank( + all_chunks, request.question, top_k=10 + ) - # Step 3: Build formatted context list - all_chunks = [] - for doc, meta, chunk_id in chunks_with_meta: - all_chunks.append({ - "chunk_id": chunk_id, - "page_title": meta.get("title", "Unknown Source"), - "section": meta.get("parent_title", ""), - "text": doc.strip().replace("\r\n", "\n"), - }) - - # Step 4: LLM Re-ranking - filtered_chunks = gemini.filter_chunks(all_chunks, request.question) - - # Enforce max 3 chunks and context cap + logger.info( + f"[RAG] unfiltered={len(all_chunks)} chunks, " + f"after_rerank={len(reranked_for_generation)} chunks | " + f"titles={[c['page_title'] for c in reranked_for_generation]}" + ) + + # Enforce context cap final_chunks = [] total_chars = 0 - for chunk in filtered_chunks[:3]: + for chunk in reranked_for_generation: text = chunk["text"] if total_chars + len(text) > MAX_CONTEXT_CHARS: remaining = MAX_CONTEXT_CHARS - total_chars @@ -169,8 +162,12 @@ async def send_message( debug=request.debug, conversation_history=conversation_history, ) + except Exception as e: logger.error(f"RAG pipeline error: {e}") + all_chunks = [] + scored_chunks = [] + final_chunks = [] answer = ( "Sorry, I encountered an error processing your question. Please try again." ) @@ -192,7 +189,19 @@ async def send_message( db.refresh(user_msg) db.refresh(assistant_msg) - return SendMessageResponse(user_message=user_msg, assistant_message=assistant_msg) + debug_info = None + if request.debug: + debug_info = { + "unfiltered_chunks": all_chunks, + "reranked_chunks": scored_chunks, + "final_chunks": final_chunks, + } + + return SendMessageResponse( + user_message=user_msg, + assistant_message=assistant_msg, + debug_info=debug_info, + ) @router.patch("/{conversation_id}", response_model=ConversationSummary) @@ -224,8 +233,9 @@ async def stream_message( request: SendMessageRequest, current_user: User = Depends(get_current_user), db: Session = Depends(get_db), - chroma: ChromaManager = Depends(get_chroma_manager), + hybrid: HybridRetriever = Depends(get_hybrid_retriever), gemini: GeminiClient = Depends(get_gemini_client), + reranker: VoyageReranker = Depends(get_voyage_reranker), ): conv = ( db.query(Conversation) @@ -247,29 +257,19 @@ async def stream_message( # RAG retrieval try: - results = chroma.query(request.question, n_results=10) - - seen_ids = set() - chunks_with_meta = [] - - if results and results.get("documents") and results["documents"][0]: - docs = results["documents"][0] - metas = results.get("metadatas", [{}])[0] if results.get("metadatas") else [{}] * len(docs) - ids = results.get("ids", [[]])[0] if results.get("ids") else [str(i) for i in range(len(docs))] - - for doc, meta, chunk_id in zip(docs, metas, ids): - if chunk_id not in seen_ids: - seen_ids.add(chunk_id) - chunks_with_meta.append((doc, meta, chunk_id)) + # Step 1: Hybrid Retrieval (vector + BM25, merged via RRF) + all_chunks = hybrid.search(request.question, vector_top_k=15, bm25_top_k=15, final_top_k=15) + # Step 2: Sibling Expansion + seen_ids = {chunk["chunk_id"] for chunk in all_chunks} parent_ids_to_expand = { - meta.get("parent_id") - for doc_text, meta, _ in chunks_with_meta - if len(doc_text.strip()) < 100 and meta.get("parent_id") + chunk.get("parent_id") + for chunk in all_chunks + if len(chunk["text"].strip()) < 100 and chunk.get("parent_id") } for parent_id in parent_ids_to_expand: - sibling_results = chroma.get_by_parent(parent_id, limit=5) + sibling_results = hybrid.chroma.get_by_parent(parent_id, limit=5) if sibling_results and sibling_results.get("documents"): sib_docs = sibling_results["documents"] sib_metas = sibling_results.get("metadatas", [{}] * len(sib_docs)) @@ -278,22 +278,18 @@ async def stream_message( for doc, meta, chunk_id in zip(sib_docs, sib_metas, sib_ids): if chunk_id not in seen_ids: seen_ids.add(chunk_id) - chunks_with_meta.append((doc, meta, chunk_id)) + all_chunks.append({ + "chunk_id": chunk_id, + "page_title": meta.get("title", "Unknown Source"), + "section": meta.get("parent_title", ""), + "text": doc.strip().replace("\r\n", "\n"), + }) + + reranked_for_generation, _ = reranker.rerank(all_chunks, request.question, top_k=10) - all_chunks = [] - for doc, meta, chunk_id in chunks_with_meta: - all_chunks.append({ - "chunk_id": chunk_id, - "page_title": meta.get("title", "Unknown Source"), - "section": meta.get("parent_title", ""), - "text": doc.strip().replace("\r\n", "\n"), - }) - - filtered_chunks = gemini.filter_chunks(all_chunks, request.question) - final_chunks = [] total_chars = 0 - for chunk in filtered_chunks[:3]: + for chunk in reranked_for_generation: text = chunk["text"] if total_chars + len(text) > MAX_CONTEXT_CHARS: remaining = MAX_CONTEXT_CHARS - total_chars @@ -311,7 +307,7 @@ async def stream_message( # Load conversation history (last 6 messages before the new user message) conversation_history = [ {"role": m.role, "content": m.content} - for m in (conv.messages or [])[-7:-1] # exclude the just-added user msg + for m in (conv.messages or [])[-7:-1] # exclude the just-committed user msg ] async def event_generator(): diff --git a/src/backend/schemas/chat.py b/src/backend/schemas/chat.py index 48c8c30..9e3345f 100644 --- a/src/backend/schemas/chat.py +++ b/src/backend/schemas/chat.py @@ -1,30 +1,30 @@ -from typing import Optional +# from typing import Optional -from pydantic import BaseModel, Field +# from pydantic import BaseModel, Field -class ChatRequest(BaseModel): - question: str = Field( - ..., description="The user's question to ask the RAG pipeline." - ) - debug: bool = Field( - False, description="Enable debug mode to include chunk IDs in the response." - ) +# class ChatRequest(BaseModel): +# question: str = Field( +# ..., description="The user's question to ask the RAG pipeline." +# ) +# debug: bool = Field( +# False, description="Enable debug mode to include chunk IDs in the response." +# ) -class ChatResponse(BaseModel): - answer: str = Field( - ..., description="The generated context-aware answer from the Gemini LLM." - ) - sources: Optional[list[str]] = Field( - default=None, - description="List of Notion page titles used as context for the answer.", - ) - chunks: Optional[list[dict]] = Field( - default=None, - description="The raw context chunks sent to the LLM.", - ) - unfiltered_chunks: Optional[list[dict]] = Field( - default=None, - description="The raw context chunks retrieved from ChromaDB before LLM filtering.", - ) +# class ChatResponse(BaseModel): +# answer: str = Field( +# ..., description="The generated context-aware answer from the Gemini LLM." +# ) +# sources: Optional[list[str]] = Field( +# default=None, +# description="List of Notion page titles used as context for the answer.", +# ) +# chunks: Optional[list[dict]] = Field( +# default=None, +# description="The raw context chunks sent to the LLM.", +# ) +# unfiltered_chunks: Optional[list[dict]] = Field( +# default=None, +# description="The raw context chunks retrieved from ChromaDB before LLM filtering.", +# ) diff --git a/src/backend/schemas/conversation.py b/src/backend/schemas/conversation.py index 22a8fa0..324a98a 100644 --- a/src/backend/schemas/conversation.py +++ b/src/backend/schemas/conversation.py @@ -1,4 +1,5 @@ from datetime import datetime +from typing import Optional from pydantic import BaseModel, Field @@ -43,3 +44,4 @@ class SendMessageRequest(BaseModel): class SendMessageResponse(BaseModel): user_message: MessageSchema assistant_message: MessageSchema + debug_info: Optional[dict] = None diff --git a/src/backend/transform/notion_ingestory.py b/src/backend/transform/notion_ingestory.py index c2ccb45..2ef51e2 100644 --- a/src/backend/transform/notion_ingestory.py +++ b/src/backend/transform/notion_ingestory.py @@ -1,33 +1,25 @@ import json -from langchain_text_splitters import MarkdownHeaderTextSplitter, RecursiveCharacterTextSplitter +from langchain_text_splitters import RecursiveCharacterTextSplitter from src.backend.load.chroma_manager import ChromaManager +from src.backend.load.bm25_manager import BM25Manager, BM25_INDEX_PATH class NotionIngestor: - def __init__(self, file_path="./notion_data.json", chunk_size=500, chunk_overlap=100): + def __init__(self, file_path="./notion_data.json", chunk_size=1000, chunk_overlap=200): """ Initializes the ingestion pipeline, database connection, and splitters. """ self.file_path = file_path self.chunk_size = chunk_size self.chunk_overlap = chunk_overlap - + # Instantiate the database manager self.db = ChromaManager() - + # Setup splitters on initialization self._setup_splitters() def _setup_splitters(self): """Private method to configure the LangChain splitters.""" - headers_to_split_on = [ - ("#", "Header 1"), - ("##", "Header 2"), - ("###", "Header 3"), - ] - self.markdown_splitter = MarkdownHeaderTextSplitter( - headers_to_split_on=headers_to_split_on - ) - self.text_splitter = RecursiveCharacterTextSplitter( # Custom separators tailored for technical documentation in order of preference separators=["\n\n", "\n```\n", "\n---", "\n- ", "\n", " ", ""], @@ -66,15 +58,12 @@ def _build_parent_child_maps(self, raw_docs): def _enrich_content(self, doc, id_to_doc, parent_to_children): """ - Enrich a document's content with parent-child context. - - For PARENT documents: append child page summaries to content - For CHILD documents: prepend parent context info + Enrich a document's content with parent context. + Child pages are indexed separately, so their summaries are not appended here + to avoid content cross-contamination. """ content = doc.get("content", "") - doc_id = doc.get("id") parent_id = doc.get("parent_id") - title = doc.get("title", "Untitled") enriched_parts = [] @@ -82,117 +71,66 @@ def _enrich_content(self, doc, id_to_doc, parent_to_children): if parent_id and parent_id in id_to_doc: parent_doc = id_to_doc[parent_id] parent_title = parent_doc.get("title", "Untitled") - enriched_parts.append( - f"[Parent Page: {parent_title}]\n" - ) + enriched_parts.append(f"[Parent Page: {parent_title}]\n") - # Add the main content enriched_parts.append(content) - # If this doc has children, append their summaries - children = parent_to_children.get(doc_id, []) - if children: - enriched_parts.append("\n\n## Child Pages Summary") - for child in children: - child_title = child.get("title", "Untitled") - child_content = child.get("content", "") - # Take the first ~300 chars as a summary - summary = child_content[:300].strip() - if len(child_content) > 300: - summary += "..." - enriched_parts.append( - f"\n### {child_title}\n{summary}" - ) - return "\n".join(enriched_parts) def _process_document(self, doc, id_to_doc, parent_to_children): - """Private method to chunk and format a single document with enriched context.""" + """ + Chunk a single document using RecursiveCharacterTextSplitter. + """ content = self._enrich_content(doc, id_to_doc, parent_to_children) if not content.strip(): return [], [], [] - # Physical Split (Enforce Size Limits) - # We skip MarkdownHeaderTextSplitter because it has a known bug of dropping - # unheadered text at the end of long documents. physical_splits = self.text_splitter.create_documents([content]) - # Merge very short chunks (< 50 chars) into the next chunk - # This prevents tiny fragments like "Checkpoint #1 Slideshow" from - # becoming standalone chunks that lack meaningful content. - MIN_CHUNK_CHARS = 50 - merged_splits = [] - carry_over = "" - for split in physical_splits: - if len(split.page_content.strip()) < MIN_CHUNK_CHARS: - carry_over += split.page_content + "\n" - else: - if carry_over: - split.page_content = carry_over + split.page_content - carry_over = "" - merged_splits.append(split) - # If there's leftover carry_over at the very end of the file - if carry_over: - if merged_splits: - # Append the trailing short text to the last valid chunk - merged_splits[-1].page_content += "\n" + carry_over.strip() - elif physical_splits: - # Edge case: the entire document was just one tiny <50 char string - physical_splits[-1].page_content = carry_over.strip() - merged_splits.append(physical_splits[-1]) - - physical_splits = merged_splits chunks = [] metadatas = [] ids = [] - # Build parent_title for metadata parent_id = doc.get("parent_id") parent_title = None if parent_id and parent_id in id_to_doc: parent_title = id_to_doc[parent_id].get("title", "Untitled") - # Format for ChromaDB for i, chunk in enumerate(physical_splits): chunks.append(chunk.page_content) - + chunk_metadata = { "parent_id": doc.get("id"), "title": doc.get("title", "Untitled"), "url": doc.get("url"), "source_type": doc.get("source_type", "page"), - "chunk_index": i + "chunk_index": i, + "section_header": "", } - # Add parent context to metadata for retrieval-time grouping if parent_title: chunk_metadata["parent_title"] = parent_title if parent_id: chunk_metadata["notion_parent_id"] = parent_id - # Merge the Markdown headers extracted by LangChain - chunk_metadata.update(chunk.metadata) - metadatas.append(chunk_metadata) - - # Deterministic ID creation ids.append(f"{doc['id']}_{i}") return chunks, metadatas, ids def run_pipeline(self): """Public method to execute the full ingestion pipeline.""" - print(f"📂 Loading data from {self.file_path}...") + print(f"Loading data from {self.file_path}...") raw_docs = self._load_data() # Build parent-child relationship maps - print("🔗 Building parent-child relationship maps...") + print("Building parent-child relationship maps...") id_to_doc, parent_to_children = self._build_parent_child_maps(raw_docs) print(f" Found {len(parent_to_children)} parent documents with children") all_chunks = [] all_metadatas = [] all_ids = [] - print(f"✂️ Running Hybrid Chunking on {len(raw_docs)} documents (with context enrichment)...") + print(f"Running Hybrid Chunking on {len(raw_docs)} documents (with context enrichment)...") for doc in raw_docs: chunks, metadatas, ids = self._process_document(doc, id_to_doc, parent_to_children) @@ -201,10 +139,16 @@ def run_pipeline(self): all_ids.extend(ids) if all_chunks: - print(f"💾 Storing {len(all_chunks)} chunks into Chroma...") + print(f"Storing {len(all_chunks)} chunks into Chroma...") self.db.add_documents(all_chunks, all_metadatas, all_ids) + + print("Building BM25 index...") + bm25 = BM25Manager() + bm25.build_index(all_chunks, all_metadatas, all_ids) + bm25.save(BM25_INDEX_PATH) + print(f"BM25 index saved to {BM25_INDEX_PATH}") else: - print("⚠️ No chunks were created.") + print("No chunks were created.") # --- 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